CB Content Bot is a proper content.prepare plugin now. I can't really help you in regards to Articles Anywhere usage. Ideally it too should be a proper content.prepare usage, but since it executes before content.prepare usages it can't really be extended properly.
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Thanks for your help. I was able to get around the disparity by using the Regular Labs "Sourcerer" plugin so that I could use PHP to access the CB API directly.
Actually, I found an even better solution: I simply created a new template (by copying the default) for the articles plugin at components/com_comprofiler/plugin/user/plug_cbarticles/templates and used core CB functions to render everything exactly as I wanted--no third party plugins required. This added search functionality and the counter on the tab--which are part of the articles plugin--that I didn't have before. Thanks again for your help.